Kyle Harrington

Bioimaging and visualization · 2018

FunImageJ: a Lisp framework for scientific image processing

Kyle I. S. Harrington, Curtis T. Rueden, Kevin W. Eliceiri

Bioinformatics, 34(5), 899-900

doi:10.1093/bioinformatics/btx710pdf

Abstract

Summary: FunImageJ is a Lisp framework for scientific image processing built upon the ImageJ software ecosystem. The framework provides a natural functional-style for programming, while accounting for the performance requirements necessary in big data processing commonly encountered in biological image analysis.

Availability and implementation: Freely available plugin to Fiji (http://fiji.sc/#download). Installation and use instructions available at http://imagej.net/FunImageJ.

Contact: [email protected]

Supplementary information: Supplementary data are available at Bioinformatics online.