Kyle Harrington 🤖🧪
Kyle Harrington

AI/ML Research Scientist

About Me

Kyle Harrington is an AI/ML Research Scientist at the Chan Zuckerberg Initiative. He leads machine learning projects for biological imaging, focusing on deep learning for 3D computer vision and large-scale data analysis. He has developed and contributed to numerous tools including napari, the Fiji ecosystem (e.g. sciview), album, and more. His research applies machine learning to biological problems:

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Interests
  • Machine Learning for 3D Computer Vision
  • Deep Learning at Scale
  • Computational Biology
  • Artificial Life
Education
  • Postdoctoral Fellow, Pathology

    Harvard Medical School

  • PhD Computer Science

    Brandeis University

  • MA Computer Science

    Brandeis University

  • BA Artificial Life

    Hampshire College

Featured Publications
Recent Publications
(2024). Annotating CryoET Volumes: A Machine Learning Challenge. bioRxiv.
(2024). Open-source Tools for CryoET Particle Picking Machine Learning Competitions. bioRxiv.
(2024). Surforama: interactive exploration of volumetric data by leveraging 3D surfaces. bioRxiv.
(2024). Polarity-JaM: An image analysis toolbox for cell polarity, junction and morphology quantification. bioRxiv.
(2023). napari-imagej: ImageJ Ecosystem Access from napari. Nature Methods, 20(10), 1443-1444.
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